CTK-Hackfest-Nov-2014 - Revision history

JChris.FillionR: /* Tuesday */

2014-11-17T15:53:31Z

Tuesday

← Older revision		Revision as of 11:53, 17 November 2014
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	Afternoon:		Afternoon:

	* 13:30 Lab Tour		* 13:30 [[CTK-Hackfest-Nov-2014/LabTour\|Lab Tour]]

	Evening:		Evening:

JChris.FillionR: /* Friday */

2014-11-08T01:41:31Z

Friday

← Older revision		Revision as of 21:41, 7 November 2014
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	** Search for keywords and get matching CLIs		** Search for keywords and get matching CLIs
	** Use it to browse CLI descriptions and clean-up contents		** Use it to browse CLI descriptions and clean-up contents
	** [[https://github.com/commontk/cli-indexer commontk/cli-indexer]] repository. Creates JSON descriptions from CLI XML.		** [https://github.com/commontk/cli-indexer commontk/cli-indexer] repository. Creates JSON descriptions from CLI XML.
	** Every institution could publish the JSON description of their CLIs and publish it		** Every institution could publish the JSON description of their CLIs and publish it
	** There is a pypi package for cli-indexer		** There is a pypi package for cli-indexer

JChris.FillionR: /* Thursday */

2014-11-08T00:15:45Z

Thursday

← Older revision		Revision as of 20:15, 7 November 2014
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	* dcmjs: Update to use latest version of emscripten		* dcmjs: Update to use latest version of emscripten
	* dcmjs: create dcmjs.org github project and add deploy mechanism		* dcmjs: create dcmjs.org github project and add deploy mechanism
	* dcmjs: Improve user experience of dcmjs.org website		* dcmjs: Improve user experience of http://dcmjs.org website
	* Re-started Slicer CTK CLI integration		* Re-started Slicer CTK CLI integration
	* Discussed extension of CLI schema to support optional parameter.		* Discussed extension of CLI schema to support optional parameter.

JChris.FillionR: /* Thursday */

2014-11-08T00:15:26Z

Thursday

← Older revision		Revision as of 20:15, 7 November 2014
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	JC:		JC:
	* ~~Using~~ latest version of emscripten		* dcmjs: Update to use latest version of emscripten
	* ~~Website updates for~~ dcmjs		* dcmjs: create dcmjs.org github project and add deploy mechanism
			* dcmjs: Improve user experience of dcmjs.org website
	* Re-started Slicer CTK CLI integration		* Re-started Slicer CTK CLI integration
			* Discussed extension of CLI schema to support optional parameter.
			* Improved CTK PythonQt wrapping to support import from regular python shell. See [https://github.com/commontk/CTK/pull/520 commontk/CTK#520]

	Hans:		Hans:

Sascha: /* Friday */

2014-11-07T10:33:43Z

Friday

← Older revision		Revision as of 06:33, 7 November 2014
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	11:00: Closing discussion		11:00: Closing discussion
			* CLI Elasticsearch (Hans)
			** Search for keywords and get matching CLIs
			** Use it to browse CLI descriptions and clean-up contents
			** [[https://github.com/commontk/cli-indexer commontk/cli-indexer]] repository. Creates JSON descriptions from CLI XML.
			** Every institution could publish the JSON description of their CLIs and publish it
			** There is a pypi package for cli-indexer

	Afternoon: hack or travel		Afternoon: hack or travel

Sascha: /* Agenda */

2014-11-07T09:20:27Z

Agenda

← Older revision		Revision as of 05:20, 7 November 2014
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	* Plans for the week		* Plans for the week
	* Review [https://github.com/commontk/CTK/issues?state=open open issues on github].		* Review [https://github.com/commontk/CTK/issues?state=open open issues on github].

			Afternoon:
			* Welcome by Prof. Hans-Peter Meinzer
			* Presentation about [[Media:The_Common_Toolkit_Jubilee.pptx\|The Common Toolkit Jubilee]]

	Evening:		Evening:

			* Dinner 20:15 @ [http://www.heidelberger-kulturbrauerei.de/en/ Kulturbrauerei], [https://www.google.de/maps/dir/Hotel+Holl%C3%A4nder+Hof,+Neckarstaden+66,+69117+Heidelberg/Kulturbrauerei+Heidelberg,+Leyergasse+6,+69117+Heidelberg/@49.413196,8.7102803,18z/data=!3m1!4b1!4m14!4m13!1m5!1m1!1s0x4797c10638e496a5:0xe28b6a91325a2c23!2m2!1d8.709242!2d49.413192!1m5!1m1!1s0x4797c1a81df9996d:0xb0cec22d395e79e1!2m2!1d8.713414!2d49.41318!3e2 directions], Pickup ~20:00 at Holländer Hof
	Dinner 20:15 @ [http://www.heidelberger-kulturbrauerei.de/en/ Kulturbrauerei], [https://www.google.de/maps/dir/Hotel+Holl%C3%A4nder+Hof,+Neckarstaden+66,+69117+Heidelberg/Kulturbrauerei+Heidelberg,+Leyergasse+6,+69117+Heidelberg/@49.413196,8.7102803,18z/data=!3m1!4b1!4m14!4m13!1m5!1m1!1s0x4797c10638e496a5:0xe28b6a91325a2c23!2m2!1d8.709242!2d49.413192!1m5!1m1!1s0x4797c1a81df9996d:0xb0cec22d395e79e1!2m2!1d8.713414!2d49.41318!3e2 directions], Pickup ~20:00 at Holländer Hof

	==== Tuesday ====		==== Tuesday ====

Stefan Baumann: /* Thursday */

2014-11-06T16:47:30Z

Thursday

← Older revision		Revision as of 12:47, 6 November 2014
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	Stefan:		Stefan:
	* Added mapping/de-identification functionality to dcmjs (minimal feature set like CTP)		* Added [[Media:Testmr.txt \| mapping/de-identification]] functionality to dcmjs (minimal feature set like CTP)

	Steve:		Steve:

Sascha at 15:13, 6 November 2014

2014-11-06T15:13:28Z

← Older revision		Revision as of 11:13, 6 November 2014
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	During the day: hack, hack, hack…		During the day: hack, hack, hack…

			Short wrap-up:

			Christian:
			* Fixed Qt5 DICOM & Plugin Framework issues
			* Doxygen fixes
			* Started integrating CTK DICOM Widget improvements

			JC:
			* Using latest version of emscripten
			* Website updates for dcmjs
			* Re-started Slicer CTK CLI integration

			Hans:
			* Many discussion topics (Chronicle, CLI)
			* CLI documentation overview (CTK Wiki)
			* Investigated elasticsearch database for CLI modules
			* OpenInventor <-> VTK integration

			Stefan:
			* Added mapping/de-identification functionality to dcmjs (minimal feature set like CTP)

			Steve:
			* dcmjs organize tool
			** exploring boundaries (extracting data etc.)
			** anonymization
			* DICOM segmentation object discussions
			** How to support CLIs?

			Michael:
			* Compiled CTK with new dcmtk snapshot (worked)
			* Worked on dcmseg module

			Marco:
			* Discussions about QIICR
			* Closed a couple of GitHub issues

			Ivo:
			* Discussions about QIICR, XNAT
			* Compiling MRML outside of Slicer

			Andreas:
			* XNAT upload (qRestAPI changes)
			* DICOM discussions (widget usability, anonymization tools)

			Nicolas:
			* Wrapped XNAT library into Python (for usage in NiPype)
			* Usage outside of a QApplication needs investigation

			Gergely:
			* Added possibility for optional CLI parameter

			Miklos:
			* Started XNAT query API
			* Hit API limits -> focus on caching objects
			* Needs more discussion

			Sascha:
			* Qt5 fixes
			* Travis integration


	Evening:		Evening:

Pieper at 06:34, 6 November 2014

2014-11-06T06:34:14Z

← Older revision		Revision as of 02:34, 6 November 2014
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	== Event pictures ==		== Event pictures ==

			[[File:Ctk.2014,11.png\|600px]]

	=== Progress ===		=== Progress ===

Ralf Floca: /* DICOM */

2014-11-05T18:39:30Z

DICOM

← Older revision		Revision as of 14:39, 5 November 2014
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	** Goal is to de-identify with various tools and compare results with [ftp://medical.nema.org/medical/dicom/Final/sup142_ft.pdf supplement 142 of the DICOM standard].		** Goal is to de-identify with various tools and compare results with [ftp://medical.nema.org/medical/dicom/Final/sup142_ft.pdf supplement 142 of the DICOM standard].
	** There is a separate page, which provides an overview of existing de-identification tools: [[DICOM de-identification tool overview]]		** There is a separate page, which provides an overview of existing de-identification tools: [[DICOM de-identification tool overview]]

			* ctkDICOM improvments (Ralf); discussed ideas:
			** Introduce "compact and detailed view mode" to ctkDICOMTableView and ctkDICOMTableManager. Basic idea is that you can give the widgets a list of "high priority" tags -> in compact mode all columns of non priority tags will be filter. You can define the active mode via property / slot (to e.g. easily connect it with a control widget signal).
			** Refactoring of one unified "search definition widget" and separated generators for "dicom q/r" and sql statement that use the search definition. This would give the possibility for instance to use the same search widget in different places (e.g. in the ctkDICOMQueryRetrieveWidget or ctkDICOMTableManager)

	==== XNAT ====		==== XNAT ====